Transcript: ENST00000529150.1 TRAF6-003

Description

TNF receptor-associated factor 6, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:12036]

Gene Synonyms

MGC:3310, RNF85

Location

About this transcript

This transcript has 4 exons, is associated with 2482 variant alleles and maps to 261 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000526995.1	TRAF6-001	4627	522aa	ENSP00000433623.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7901	Q9Y4K3	NM_004620.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000348124.5	TRAF6-002	2558	522aa	ENSP00000337853.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7901	Q9Y4K3	NM_145803.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529150.1	TRAF6-003	575	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 575 bps,

Version

ENST00000529150.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000389532 (version 1)

Annotation Attributes

dotter confirmed [Definitions]