Transcript: ENST00000530342.1 KDM2A-010

Description

lysine (K)-specific demethylase 2A [Source:HGNC Symbol;Acc:13606]

Gene Synonyms

CXXC8, DKFZP434M1735, FBL11, FBL7, FBXL11, FLJ00115, JHDM1A, KIAA1004, LILINA

Location

Chromosome 11: 67,007,518-67,023,844 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 7618 variant alleles and maps to 554 oligo probes.

Gene

This transcript is a product of gene ENSG00000173120.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000529006.2	KDM2A-002	6967	1162aa	ENSP00000432786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44657	I3VM53 I3VM54 Q9Y2K7	NM_012308.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398645.2	KDM2A-001	6511	782aa	ENSP00000381640.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3VM55 Q9Y2K7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530342.1	KDM2A-010	3651	723aa	ENSP00000435776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58148	Q9Y2K7	NM_001256405.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308783.5	KDM2A-201	3629	620aa	ENSP00000309302.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y2K7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526258.1	KDM2A-004	5671	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531696.1	KDM2A-003	4160	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524657.1	KDM2A-006	3692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525379.1	KDM2A-005	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525041.1	KDM2A-013	697	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534486.1	KDM2A-008	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529124.1	KDM2A-007	664	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532436.1	KDM2A-014	605	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527157.1	KDM2A-012	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517637.2	KDM2A-009	463	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528380.1	KDM2A-011	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 3,651 bps, Translation length: 723 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2K7

CCDS

This transcript is a member of the Human CCDS set: CCDS58148

Version

ENST00000530342.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393148 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000530342.1 KDM2A-010

Summary