Transcript: ENST00000529006.2 KDM2A-002

Description

lysine (K)-specific demethylase 2A [Source:HGNC Symbol;Acc:13606]

Gene Synonyms

CXXC8, DKFZP434M1735, FBL11, FBL7, FBXL11, FLJ00115, JHDM1A, KIAA1004, LILINA

Location

Chromosome 11: 66,887,158-67,025,558 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 26 domains and features, is associated with 64082 variant alleles and maps to 1000 oligo probes.

Gene

This transcript is a product of gene ENSG00000173120.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000529006.2	KDM2A-002	6967	1162aa	ENSP00000432786.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44657	I3VM53 I3VM54 Q9Y2K7	NM_012308.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398645.2	KDM2A-001	6511	782aa	ENSP00000381640.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3VM55 Q9Y2K7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530342.1	KDM2A-010	3651	723aa	ENSP00000435776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58148	Q9Y2K7	NM_001256405.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000308783.5	KDM2A-201	3629	620aa	ENSP00000309302.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y2K7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526258.1	KDM2A-004	5671	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531696.1	KDM2A-003	4160	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000524657.1	KDM2A-006	3692	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525379.1	KDM2A-005	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525041.1	KDM2A-013	697	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000534486.1	KDM2A-008	666	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000529124.1	KDM2A-007	664	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532436.1	KDM2A-014	605	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527157.1	KDM2A-012	574	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517637.2	KDM2A-009	463	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000528380.1	KDM2A-011	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 6,967 bps, Translation length: 1,162 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2K7

CCDS

This transcript is a member of the Human CCDS set: CCDS44657

Version

ENST00000529006.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393140 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000529006.2 KDM2A-002

Summary