Transcript: ENST00000458245.5 GATM-012

Description

glycine amidinotransferase (L-arginine:glycine amidinotransferase) [Source:HGNC Symbol;Acc:4175]

Gene Synonyms

AGAT, AT, CCDS3

Location

Chromosome 15: 45,671,400-45,694,525 reverse strand.

About this transcript

This transcript has 5 exons, is associated with 8325 variant alleles and maps to 278 oligo probes.

Gene

This transcript is a product of gene ENSG00000171766.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396659.3	GATM-001	2597	423aa	ENSP00000379895.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10122	H0YKW9 H0YLC6 H0YN43 P50440	NM_001482.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558336.1	GATM-002	1522	391aa	ENSP00000454008.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKW9 H0YLC6 H0YN43 P50440	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561148.1	GATM-008	903	31aa	ENSP00000453860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YN43	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000559885.1	GATM-007	579	15aa	ENSP00000453087.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558163.1	GATM-004	569	167aa	ENSP00000453781.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLC6 H0YMX4 H0YN43	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558537.1	GATM-006	493	32aa	ENSP00000453151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YLC6 H0YN43	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000558118.1	GATM-005	554	96aa	ENSP00000452971.1	Nonsense mediated decay		H0YKW9	-	-
ENST00000458245.5	GATM-012	1107	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527933.2	GATM-013	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000560538.1	GATM-009	549	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558362.1	GATM-003	3911	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000558916.1	GATM-010	913	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561376.1	GATM-011	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,107 bps,

Version

ENST00000458245.5

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387869 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000458245.5 GATM-012

Summary