Transcript: ENST00000301061.4 WNT10B-001

Description

wingless-type MMTV integration site family, member 10B [Source:HGNC Symbol;Acc:12775]

Gene Synonyms

SHFM6, WNT-12, WNT12

Location

Chromosome 12: 49,359,123-49,365,546 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 18 domains and features, is associated with 3104 variant alleles and maps to 484 oligo probes.

Gene

This transcript is a product of gene ENSG00000169884.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301061.4	WNT10B-001	2274	389aa	ENSP00000301061.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8775	C9JCI2 O00744	NM_003394.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000403957.1	WNT10B-002	1817	173aa	ENSP00000385980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCC8 C9JCI2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000407467.1	WNT10B-003	1802	191aa	ENSP00000384691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCI2 Q4VAJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413630.1	WNT10B-006	623	132aa	ENSP00000398473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3H3 C9JCI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420388.1	WNT10B-004	559	102aa	ENSP00000404896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475740.1	WNT10B-005	429	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,274 bps, Translation length: 389 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00744

CCDS

This transcript is a member of the Human CCDS set: CCDS8775

Version

ENST00000301061.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000319864 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000301061.4 WNT10B-001

Summary