Transcript: ENST00000420388.1 WNT10B-004

Description

wingless-type MMTV integration site family, member 10B [Source:HGNC Symbol;Acc:12775]

Gene Synonyms

SHFM6, WNT-12, WNT12

Location

Chromosome 12: 49,363,903-49,364,672 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 434 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSG00000169884.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301061.4	WNT10B-001	2274	389aa	ENSP00000301061.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8775	C9JCI2 O00744	NM_003394.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000403957.1	WNT10B-002	1817	173aa	ENSP00000385980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCC8 C9JCI2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000407467.1	WNT10B-003	1802	191aa	ENSP00000384691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCI2 Q4VAJ4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000413630.1	WNT10B-006	623	132aa	ENSP00000398473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J3H3 C9JCI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420388.1	WNT10B-004	559	102aa	ENSP00000404896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JCI2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000475740.1	WNT10B-005	429	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 559 bps, Translation length: 102 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000420388.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000319867 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000420388.1 WNT10B-004

Summary