Transcript: ENST00000388942.3 C15orf27-001

Description

chromosome 15 open reading frame 27 [Source:HGNC Symbol;Acc:26763]

Gene Synonyms

FLJ38190

Location

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 60308 variant alleles and maps to 438 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388942.3	C15orf27-001	2520	531aa	ENSP00000373594.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10289	Q2M3C6	NM_152335.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484722.1	C15orf27-002	2292	101aa	ENSP00000435049.1	Nonsense mediated decay		H3BM28	-	-
ENST00000561302.1	C15orf27-005	1762	121aa	ENSP00000453957.1	Nonsense mediated decay		H0YNC9	-	-
ENST00000559079.1	C15orf27-004	1932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558249.1	C15orf27-003	1974	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,520 bps, Translation length: 531 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2M3C6

CCDS

This transcript is a member of the Human CCDS set: CCDS10289

Version

ENST00000388942.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000286637 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.