Transcript: ENST00000558249.1 C15orf27-003

Description

chromosome 15 open reading frame 27 [Source:HGNC Symbol;Acc:26763]

Gene Synonyms

FLJ38190

Location

About this transcript

This transcript has 3 exons, is associated with 6815 variant alleles and maps to 206 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388942.3	C15orf27-001	2520	531aa	ENSP00000373594.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10289	Q2M3C6	NM_152335.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484722.1	C15orf27-002	2292	101aa	ENSP00000435049.1	Nonsense mediated decay		H3BM28	-	-
ENST00000561302.1	C15orf27-005	1762	121aa	ENSP00000453957.1	Nonsense mediated decay		H0YNC9	-	-
ENST00000559079.1	C15orf27-004	1932	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000558249.1	C15orf27-003	1974	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,974 bps,

Version

ENST00000558249.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000419299 (version 1)