Transcript: ENST00000564970.1 PTPN9-005

Description

protein tyrosine phosphatase, non-receptor type 9 [Source:HGNC Symbol;Acc:9661]

Gene Synonyms

MEG2, PTPMEG2

Location

About this transcript

This transcript has 3 exons, is associated with 9140 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306726.2	PTPN9-001	3943	593aa	ENSP00000303554.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10280	P43378	NM_002833.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561731.1	PTPN9-004	545	174aa	ENSP00000455934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQT6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564970.1	PTPN9-005	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563835.1	PTPN9-002	338	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568108.1	PTPN9-003	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 726 bps,

Version

ENST00000564970.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420323 (version 1)