Transcript: ENST00000477721.1 GFM1-011

Description

G elongation factor, mitochondrial 1 [Source:HGNC Symbol;Acc:13780]

Gene Synonyms

COXPD1, EFG, EFG1, EFGM, EGF1, GFM, hEFG1

Location

Chromosome 3: 158,399,777-158,408,375 forward strand.

About this transcript

This transcript has 3 exons, is associated with 2285 variant alleles and maps to 192 oligo probes.

Gene

This transcript is a product of gene ENSG00000168827.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000486715.1	GFM1-001	3721	751aa	ENSP00000419038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33885	C9JA25 E5KND5 Q96RP9	NM_024996.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000264263.5	GFM1-004	3453	770aa	ENSP00000264263.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA25 Q96RP9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000478576.1	GFM1-002	2147	591aa	ENSP00000418755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ01 C9JA25	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472383.1	GFM1-010	656	17aa	ENSP00000420272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000464732.1	GFM1-007	502	60aa	ENSP00000417532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JA25	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000478254.1	GFM1-003	3470	453aa	ENSP00000417225.1	Nonsense mediated decay		C9JA25 F8WAU4	-	-
ENST00000490261.1	GFM1-008	591	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478251.1	GFM1-005	2040	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000312756.4	GFM1-006	2006	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481468.1	GFM1-009	842	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477721.1	GFM1-011	739	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 739 bps,

Version

ENST00000477721.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352281 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000477721.1 GFM1-011

Summary