Transcript: ENST00000451343.1 TNXB-006

Description

tenascin XB [Source:HGNC Symbol;Acc:11976]

Gene Synonyms

EDS3, HXBL, TENX, TN-X, TNX, TNXB1, TNXB2, TNXBS, XB, XBS

Location

Chromosome 6: 32,008,932-32,013,905 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 32 domains and features, is associated with 2560 variant alleles and maps to 2372 oligo probes.

Gene

This transcript is a product of gene ENSG00000168477.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375244.3	TNXB-001	13132	4244aa	ENSP00000364393.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B6RHJ5 E7EPZ9 Q9NPK7 Q9NPK8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375247.2	TNXB-201	13125	4242aa	ENSP00000364396.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B6RHJ5 P22105 Q9NPK7 Q9NPK8	NM_019105.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451343.1	TNXB-006	3125	673aa	ENSP00000407685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4736	B6RHJ5 P22105	NM_032470.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479795.1	TNXB-007	2742	842aa	ENSP00000418248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J7W4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442721.1	TNXB-003	372	7aa	ENSP00000389946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000490077.1	TNXB-005	2756	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486148.1	TNXB-002	2669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000498094.1	TNXB-004	792	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,125 bps, Translation length: 673 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P22105

CCDS

This transcript is a member of the Human CCDS set: CCDS4736

Version

ENST00000451343.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000268932 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000451343.1 TNXB-006

Summary