Human (GRCh37.p13)
Description

autophagy related 4B, cysteine peptidase [Source:HGNC Symbol;Acc:20790]

Gene Synonyms

APG4B, AUTL1, DKFZp586D1822, KIAA0943

About this transcript

This transcript has 13 exons, is annotated with 5 domains and features, is associated with 13277 variant alleles and maps to 926 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000405546.3ATG4B-0013294380aaENSP00000383964.3
 
Protein coding
CCDS46565C9J1C1 C9J3C0 C9JVD5
Q9Y4P1
-GENCODE basic
ENST00000404914.3ATG4B-0022878393aaENSP00000384259.3
 
Protein coding
CCDS46564C9J1C1 C9J3C0 C9JVD5
F8WD71 Q9Y4P1
NM_178326.2GENCODE basic
ENST00000402096.1ATG4B-0061685331aaENSP00000384661.1
 
Protein coding
C9J1C1 C9J3C0 C9JVD5
Q9Y4P1
-GENCODE basic
ENST00000474739.2ATG4B-2021654379aaENSP00000442378.1
 
Protein coding
C9J1C1 C9J3C0 C9JVD5
F5H7P2 F8WD71
-GENCODE basic
ENST00000396411.3ATG4B-2011384319aaENSP00000379692.3
 
Protein coding
C9J1C1 C9J3C0 C9JVD5
F8WD71
-GENCODE basic
ENST00000425239.1ATG4B-023807266aaENSP00000409895.1
 
Protein coding
C9J1C1 C9JQ72 C9JVD5
-CDS 3' incomplete
ENST00000400771.3ATG4B-025663219aaENSP00000383582.3
 
Protein coding
C9JIK8 -CDS 3' incomplete
ENST00000430617.2ATG4B-020623105aaENSP00000407389.2
 
Protein coding
C9J1C1 C9JVD5 -CDS 3' incomplete
ENST00000428861.1ATG4B-027580193aaENSP00000404783.1
 
Protein coding
H7C2A6 -CDS 5' and 3' incomplete
ENST00000419606.1ATG4B-01555366aaENSP00000400050.1
 
Protein coding
C9J1C1 -CDS 3' incomplete
ENST00000429899.1ATG4B-026524147aaENSP00000410526.1
 
Protein coding
C9J1C1 C9J3C0 C9JVD5
-CDS 3' incomplete
ENST00000344376.5ATG4B-005156676aaENSP00000344960.5
 
Nonsense mediated decay
--CDS 5' incomplete
ENST00000400772.2ATG4B-01162588aaENSP00000383583.2
 
Nonsense mediated decay
F2Z2K8 --
ENST00000415107.1ATG4B-02235688aaENSP00000390597.1
 
Nonsense mediated decay
F2Z2K8 --
ENST00000491867.1ATG4B-010435No protein-
 
Processed transcript
---
ENST00000482507.1ATG4B-0042414No protein-
 
Retained intron
---
ENST00000494465.1ATG4B-0032365No protein-
 
Retained intron
---
ENST00000475693.1ATG4B-0082237No protein-
 
Retained intron
---
ENST00000483778.1ATG4B-0121103No protein-
 
Retained intron
---
ENST00000493618.1ATG4B-024899No protein-
 
Retained intron
---
ENST00000460211.1ATG4B-028871No protein-
 
Retained intron
---
ENST00000494132.1ATG4B-029828No protein-
 
Retained intron
---
ENST00000475195.1ATG4B-014762No protein-
 
Retained intron
---
ENST00000468018.1ATG4B-021721No protein-
 
Retained intron
---
ENST00000465399.1ATG4B-016581No protein-
 
Retained intron
---
ENST00000479554.1ATG4B-013556No protein-
 
Retained intron
---
ENST00000479941.1ATG4B-030374No protein-
 
Retained intron
---
Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,294 bps, Translation length: 380 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS46565

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y4P1

Version

ENST00000405546.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000322966 (version 5)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.