Description
autophagy related 4B, cysteine peptidase [Source:HGNC Symbol;Acc:20790]
Gene Synonyms
APG4B, AUTL1, DKFZp586D1822, KIAA0943
Location
Chromosome 2: 242,577,050-242,612,014 forward strand.
About this transcript
This transcript has 12 exons, is associated with 19080 variant alleles and maps to 796 oligo probes.
Gene
This transcript is a product of gene ENSG00000168397.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000405546.3 | ATG4B-001 | 3294 | 380aa | ENSP00000383964.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46565 | C9J1C1 C9J3C0 C9JVD5 Q9Y4P1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000404914.3 | ATG4B-002 | 2878 | 393aa | ENSP00000384259.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46564 | C9J1C1 C9J3C0 C9JVD5 F8WD71 Q9Y4P1 | NM_178326.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000402096.1 | ATG4B-006 | 1685 | 331aa | ENSP00000384661.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9J3C0 C9JVD5 Q9Y4P1 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000474739.2 | ATG4B-202 | 1654 | 379aa | ENSP00000442378.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9J3C0 C9JVD5 F5H7P2 F8WD71 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000396411.3 | ATG4B-201 | 1384 | 319aa | ENSP00000379692.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9J3C0 C9JVD5 F8WD71 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000425239.1 | ATG4B-023 | 807 | 266aa | ENSP00000409895.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9JQ72 C9JVD5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000400771.3 | ATG4B-025 | 663 | 219aa | ENSP00000383582.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JIK8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000430617.2 | ATG4B-020 | 623 | 105aa | ENSP00000407389.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9JVD5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000428861.1 | ATG4B-027 | 580 | 193aa | ENSP00000404783.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C2A6 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000419606.1 | ATG4B-015 | 553 | 66aa | ENSP00000400050.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000429899.1 | ATG4B-026 | 524 | 147aa | ENSP00000410526.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J1C1 C9J3C0 C9JVD5 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000344376.5 | ATG4B-005 | 1566 | 76aa | ENSP00000344960.5 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000400772.2 | ATG4B-011 | 625 | 88aa | ENSP00000383583.2 | Nonsense mediated decay | F2Z2K8 | - | - | |
| ENST00000415107.1 | ATG4B-022 | 356 | 88aa | ENSP00000390597.1 | Nonsense mediated decay | F2Z2K8 | - | - | |
| ENST00000491867.1 | ATG4B-010 | 435 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482507.1 | ATG4B-004 | 2414 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494465.1 | ATG4B-003 | 2365 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475693.1 | ATG4B-008 | 2237 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000483778.1 | ATG4B-012 | 1103 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000493618.1 | ATG4B-024 | 899 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460211.1 | ATG4B-028 | 871 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000494132.1 | ATG4B-029 | 828 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000475195.1 | ATG4B-014 | 762 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000468018.1 | ATG4B-021 | 721 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000465399.1 | ATG4B-016 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479554.1 | ATG4B-013 | 556 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479941.1 | ATG4B-030 | 374 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |