Transcript: ENST00000570085.1 ARIH1-002

Description

ariadne RBR E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:689]

Gene Synonyms

ARI, HARI, HHARI, MOP6, UBCH7BP

Location

Chromosome 15: 72,766,831-72,853,888 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 38551 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSG00000166233.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379887.4	ARIH1-001	6047	557aa	ENSP00000369217.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10244	Q9Y4X5	NM_005744.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564062.1	ARIH1-003	612	204aa	ENSP00000454774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000570085.1	ARIH1-002	807	167aa	ENSP00000456746.1	Nonsense mediated decay		H3BSK4	-	-
ENST00000561770.1	ARIH1-006	478	47aa	ENSP00000457767.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562891.1	ARIH1-010	613	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567762.1	ARIH1-004	319	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563310.1	ARIH1-007	4068	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566063.1	ARIH1-008	630	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565950.1	ARIH1-005	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561987.1	ARIH1-009	403	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 807 bps, Translation length: 167 residues

Version

ENST00000570085.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420404 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000570085.1 ARIH1-002

Summary