Transcript: ENST00000379887.4 ARIH1-001

Description

ariadne RBR E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:689]

Gene Synonyms

ARI, HARI, HHARI, MOP6, UBCH7BP

Location

Chromosome 15: 72,766,667-72,879,692 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 18 domains and features, is associated with 49062 variant alleles and maps to 911 oligo probes.

Gene

This transcript is a product of gene ENSG00000166233.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379887.4	ARIH1-001	6047	557aa	ENSP00000369217.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10244	Q9Y4X5	NM_005744.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564062.1	ARIH1-003	612	204aa	ENSP00000454774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000570085.1	ARIH1-002	807	167aa	ENSP00000456746.1	Nonsense mediated decay		H3BSK4	-	-
ENST00000561770.1	ARIH1-006	478	47aa	ENSP00000457767.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000562891.1	ARIH1-010	613	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000567762.1	ARIH1-004	319	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563310.1	ARIH1-007	4068	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566063.1	ARIH1-008	630	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565950.1	ARIH1-005	559	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561987.1	ARIH1-009	403	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 6,047 bps, Translation length: 557 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y4X5

CCDS

This transcript is a member of the Human CCDS set: CCDS10244

Version

ENST00000379887.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257350 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000379887.4 ARIH1-001

Summary