Transcript: ENST00000534549.1 JAM3-005

Description

junctional adhesion molecule 3 [Source:HGNC Symbol;Acc:15532]

Gene Synonyms

JAM-2, JAM-3, JAM-C, JAMC

Location

Chromosome 11: 133,938,966-134,014,829 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 43380 variant alleles and maps to 79 oligo probes.

Gene

This transcript is a product of gene ENSG00000166086.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299106.4	JAM3-001	3912	310aa	ENSP00000299106.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8494	Q9BX67	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529443.2	JAM3-201	3652	355aa	ENSP00000431883.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BX67	NM_032801.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441717.3	JAM3-002	3363	259aa	ENSP00000395742.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55799	Q9BX67	NM_001205329.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534549.1	JAM3-005	385	124aa	ENSP00000433206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YD98	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532252.1	JAM3-004	564	38aa	ENSP00000432455.1	Nonsense mediated decay		H0YCW9	-	-
ENST00000524969.1	JAM3-006	678	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532165.1	JAM3-007	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531302.1	JAM3-008	1048	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533711.1	JAM3-010	997	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 385 bps, Translation length: 124 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000534549.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393309 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000534549.1 JAM3-005

Summary