Transcript: ENST00000441717.3 JAM3-002

Description

junctional adhesion molecule 3 [Source:HGNC Symbol;Acc:15532]

Gene Synonyms

JAM-2, JAM-3, JAM-C, JAMC

Location

Chromosome 11: 133,938,966-134,021,646 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 13 domains and features, is associated with 48145 variant alleles and maps to 477 oligo probes.

Gene

This transcript is a product of gene ENSG00000166086.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299106.4	JAM3-001	3912	310aa	ENSP00000299106.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8494	Q9BX67	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529443.2	JAM3-201	3652	355aa	ENSP00000431883.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BX67	NM_032801.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441717.3	JAM3-002	3363	259aa	ENSP00000395742.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55799	Q9BX67	NM_001205329.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534549.1	JAM3-005	385	124aa	ENSP00000433206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YD98	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532252.1	JAM3-004	564	38aa	ENSP00000432455.1	Nonsense mediated decay		H0YCW9	-	-
ENST00000524969.1	JAM3-006	678	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532165.1	JAM3-007	660	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531302.1	JAM3-008	1048	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533711.1	JAM3-010	997	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,363 bps, Translation length: 259 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BX67

CCDS

This transcript is a member of the Human CCDS set: CCDS55799

Version

ENST00000441717.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000393304 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000441717.3 JAM3-002

Summary