Transcript: ENST00000541965.1 SALL2-009

Description

spalt-like transcription factor 2 [Source:HGNC Symbol;Acc:10526]

Gene Synonyms

HSAL2, Hsal2, KIAA0360, SAL2, Sal-2, ZNF795, p150(Sal2)

Location

Chromosome 14: 21,993,379-22,005,238 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 5654 variant alleles and maps to 98 oligo probes.

Gene

This transcript is a product of gene ENSG00000165821.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000327430.3	SALL2-001	4925	1007aa	ENSP00000333537.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32045	F5H1G6 Q9Y467	NM_005407.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450879.2	SALL2-006	3178	906aa	ENSP00000396773.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EW59	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546363.1	SALL2-004	3094	902aa	ENSP00000440054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000317492.5	SALL2-003	1549	200aa	ENSP00000320536.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GY43	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538754.1	SALL2-005	1464	198aa	ENSP00000445916.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8N656	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537235.1	SALL2-008	659	191aa	ENSP00000438493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1G6 F5H433	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000541965.1	SALL2-009	553	99aa	ENSP00000439654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1G6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 553 bps, Translation length: 99 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000541965.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000401250 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000541965.1 SALL2-009

Summary