Transcript: ENST00000381923.2 TMEM52B-002

Description

transmembrane protein 52B [Source:HGNC Symbol;Acc:26438]

Gene Synonyms

C12orf59, FLJ31166

Location

Chromosome 12: 10,323,141-10,344,384 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 10031 variant alleles and maps to 341 oligo probes.

Gene

This transcript is a product of gene ENSG00000165685.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000298530.3	TMEM52B-001	2731	163aa	ENSP00000298530.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8619	Q4KMG9	NM_153022.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381923.2	TMEM52B-002	2601	183aa	ENSP00000371348.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66314	F5H230 Q4KMG9	NM_001079815.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536952.1	TMEM52B-201	1456	183aa	ENSP00000446102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS66314	F5H230 Q4KMG9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543484.1	TMEM52B-005	542	90aa	ENSP00000445582.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H230	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545924.1	TMEM52B-004	364	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000334148.7	TMEM52B-003	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000546153.1	TMEM52B-006	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,601 bps, Translation length: 183 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q4KMG9

CCDS

This transcript is a member of the Human CCDS set: CCDS66314

Version

ENST00000381923.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000399645 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381923.2 TMEM52B-002

Summary