Transcript: ENST00000379644.4 HGSNAT-001

Description

heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:26527]

Gene Synonyms

FLJ32731, HGNAT, MPS3C, TMEM76

Location

Chromosome 8: 42,995,598-43,057,998 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 20 domains and features, is associated with 28362 variant alleles and maps to 777 oligo probes.

Gene

This transcript is a product of gene ENSG00000165102.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000458501.2	HGSNAT-202	5249	663aa	ENSP00000389524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68CP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379644.4	HGSNAT-001	5236	635aa	ENSP00000368965.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47852	Q68CP4	NM_152419.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521576.1	HGSNAT-003	2332	352aa	ENSP00000429029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJN0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297798.7	HGSNAT-201	2324	367aa	ENSP00000297798.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJN0 E7ET79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524016.1	HGSNAT-009	757	253aa	ENSP00000428322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000522082.1	HGSNAT-006	560	184aa	ENSP00000430151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGH7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520704.1	HGSNAT-002	1451	172aa	ENSP00000429109.1	Nonsense mediated decay		E5RJC4	-	-
ENST00000517319.1	HGSNAT-005	491	97aa	ENSP00000430032.1	Nonsense mediated decay		E5RH11	-	-
ENST00000523989.1	HGSNAT-010	1994	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519705.1	HGSNAT-004	1513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519000.1	HGSNAT-007	721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520678.1	HGSNAT-008	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 5,236 bps, Translation length: 635 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q68CP4

CCDS

This transcript is a member of the Human CCDS set: CCDS47852

Version

ENST00000379644.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000377293 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000379644.4 HGSNAT-001

Summary