Transcript: ENST00000523989.1 HGSNAT-010

Description

heparan-alpha-glucosaminide N-acetyltransferase [Source:HGNC Symbol;Acc:26527]

Gene Synonyms

FLJ32731, HGNAT, MPS3C, TMEM76

Location

Chromosome 8: 43,050,960-43,053,050 forward strand.

About this transcript

This transcript has 2 exons, is associated with 911 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSG00000165102.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000458501.2	HGSNAT-202	5249	663aa	ENSP00000389524.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q68CP4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379644.4	HGSNAT-001	5236	635aa	ENSP00000368965.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47852	Q68CP4	NM_152419.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521576.1	HGSNAT-003	2332	352aa	ENSP00000429029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJN0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000297798.7	HGSNAT-201	2324	367aa	ENSP00000297798.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJN0 E7ET79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000524016.1	HGSNAT-009	757	253aa	ENSP00000428322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000522082.1	HGSNAT-006	560	184aa	ENSP00000430151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGH7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520704.1	HGSNAT-002	1451	172aa	ENSP00000429109.1	Nonsense mediated decay		E5RJC4	-	-
ENST00000517319.1	HGSNAT-005	491	97aa	ENSP00000430032.1	Nonsense mediated decay		E5RH11	-	-
ENST00000523989.1	HGSNAT-010	1994	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519705.1	HGSNAT-004	1513	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519000.1	HGSNAT-007	721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520678.1	HGSNAT-008	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,994 bps,

Version

ENST00000523989.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000377301 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000523989.1 HGSNAT-010

Summary