Transcript: ENST00000339701.3 CSMD3-007

Description

CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:19291]

Gene Synonyms

KIAA1894

Location

Chromosome 8: 113,235,161-113,702,271 reverse strand.

About this transcript

This transcript has 56 exons, is annotated with 188 domains and features, is associated with 239238 variant alleles and maps to 1135 oligo probes.

Gene

This transcript is a product of gene ENSG00000164796.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000297405.5	CSMD3-001	13212	3707aa	ENSP00000297405.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6315	Q7Z407	NM_198123.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000343508.3	CSMD3-006	13018	3667aa	ENSP00000345799.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6317	Q7Z407	NM_198124.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000352409.3	CSMD3-201	12912	3637aa	ENSP00000343124.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXX0 Q7Z407	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455883.2	CSMD3-002	12485	3538aa	ENSP00000412263.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6316	Q7Z407	NM_052900.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339701.3	CSMD3-007	10773	2977aa	ENSP00000341558.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BXX0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519485.1	CSMD3-010	452	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493303.1	CSMD3-005	5703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000534172.1	CSMD3-011	2486	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492692.1	CSMD3-008	1830	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497026.1	CSMD3-003	1406	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000462254.1	CSMD3-009	457	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 56, Coding exons: 56, Transcript length: 10,773 bps, Translation length: 2,977 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000339701.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000347147 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000339701.3 CSMD3-007

Summary