Transcript: ENST00000506462.1 SGMS2-007

Description

sphingomyelin synthase 2 [Source:HGNC Symbol;Acc:28395]

Gene Synonyms

MGC26963, SMS2

Location

Chromosome 4: 108,745,719-108,816,703 forward strand.

About this transcript

This transcript has 3 exons, is associated with 27681 variant alleles and maps to 128 oligo probes.

Gene

This transcript is a product of gene ENSG00000164023.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394684.4	SGMS2-001	6149	365aa	ENSP00000378176.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3677	E5RGG5 E5RJ63 E5RJU3 Q8NHU3	NM_001136258.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394686.3	SGMS2-003	2127	365aa	ENSP00000378178.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3677	E5RGG5 E5RJ63 E5RJU3 Q8NHU3	NM_152621.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359079.4	SGMS2-002	1887	365aa	ENSP00000351981.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3677	E5RGG5 E5RJ63 E5RJU3 Q8NHU3	NM_001136257.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503385.1	SGMS2-010	581	44aa	ENSP00000430172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGG5 E5RJ63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506993.1	SGMS2-009	570	34aa	ENSP00000428294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503862.1	SGMS2-006	567	125aa	ENSP00000428176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJU3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000506462.1	SGMS2-007	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515332.1	SGMS2-008	498	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504754.1	SGMS2-011	459	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 582 bps,

Version

ENST00000506462.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000363698 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000506462.1 SGMS2-007

Summary