Transcript: ENST00000496737.1 SLC51A-011

Description

solute carrier family 51, alpha subunit [Source:HGNC Symbol;Acc:29955]

Gene Synonyms

OSTA, OSTalpha

Location

Chromosome 3: 195,960,018-195,967,751 forward strand.

About this transcript

This transcript has 2 exons, is associated with 3348 variant alleles and maps to 155 oligo probes.

Gene

This transcript is a product of gene ENSG00000163959.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296327.5	SLC51A-001	1463	340aa	ENSP00000296327.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3314	Q86UW1	NM_152672.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415111.1	SLC51A-010	742	23aa	ENSP00000409560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C351	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000428985.1	SLC51A-007	636	212aa	ENSP00000413951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000416660.1	SLC51A-005	572	66aa	ENSP00000405414.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2I5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000442203.1	SLC51A-006	568	58aa	ENSP00000391172.1	Nonsense mediated decay		F8WBV2	-	-
ENST00000479732.1	SLC51A-014	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496737.1	SLC51A-011	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475672.1	SLC51A-003	1208	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484407.1	SLC51A-004	1066	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472653.1	SLC51A-002	912	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475271.1	SLC51A-009	766	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476129.1	SLC51A-008	565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492794.1	SLC51A-013	482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471430.1	SLC51A-012	449	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 677 bps,

Version

ENST00000496737.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341263 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000496737.1 SLC51A-011

Summary