Transcript: ENST00000471739.1 FYCO1-005

Description

FYVE and coiled-coil domain containing 1 [Source:HGNC Symbol;Acc:14673]

Gene Synonyms

CATC2, CTRCT18, FLJ13335, RUFY3, ZFYVE7

Location

About this transcript

This transcript has 2 exons, is associated with 4196 variant alleles and maps to 64 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296137.2	FYCO1-001	8504	1478aa	ENSP00000296137.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2734	C9J2W6 Q9BQS8	NM_024513.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535325.1	FYCO1-201	4635	1498aa	ENSP00000441178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZKT7 C9J2W6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433878.1	FYCO1-003	4317	267aa	ENSP00000388136.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2W6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000438446.1	FYCO1-006	1072	149aa	ENSP00000398517.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J2W6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000471739.1	FYCO1-005	545	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 545 bps,

Version

ENST00000471739.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344605 (version 1)