Transcript: ENST00000468465.1 APOA2-004

Description

apolipoprotein A-II [Source:HGNC Symbol;Acc:601]

Gene Synonyms

Apo-AII, ApoA-II, apoAII

Location

Chromosome 1: 161,192,082-161,193,421 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 852 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSG00000158874.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000464492.1	APOA2-008	530	133aa	ENSP00000476911.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367990.3	APOA2-001	474	100aa	ENSP00000356969.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1226	P02652	NM_001643.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463273.1	APOA2-010	469	95aa	ENSP00000476740.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000468465.1	APOA2-004	421	52aa	ENSP00000476662.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470459.2	APOA2-007	416	82aa	ENSP00000477031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463812.1	APOA2-005	401	52aa	ENSP00000476890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469730.2	APOA2-009	265	66aa	ENSP00000476605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000491350.1	APOA2-002	263	27aa	ENSP00000477353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q76EI7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481511.1	APOA2-006	655	72aa	ENSP00000477054.1	Nonsense mediated decay		D3DVG8	-	-
ENST00000481413.1	APOA2-003	927	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 421 bps, Translation length: 52 residues

Version

ENST00000468465.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000083040 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000468465.1 APOA2-004

Summary