Transcript: ENST00000484262.1 WIPI2-005

Description

WD repeat domain, phosphoinositide interacting 2 [Source:HGNC Symbol;Acc:32225]

Gene Synonyms

ATG18B, Atg21, CGI-50, DKFZP434J154, DKFZp686P02188, FLJ12979, FLJ14217, FLJ42984, WIPI-2

Location

Chromosome 7: 5,253,900-5,270,695 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 9665 variant alleles and maps to 353 oligo probes.

Gene

This transcript is a product of gene ENSG00000157954.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000288828.4	WIPI2-001	4476	454aa	ENSP00000288828.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5339	Q9Y4P8	NM_015610.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401525.3	WIPI2-002	2112	436aa	ENSP00000384945.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34593	Q9Y4P8	NM_016003.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382384.2	WIPI2-007	1948	425aa	ENSP00000371821.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47532	Q9Y4P8	NM_001033519.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404704.3	WIPI2-008	1663	443aa	ENSP00000385297.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47531	Q9Y4P8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000484262.1	WIPI2-005	1504	384aa	ENSP00000429654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47533	Q9Y4P8	NM_001033520.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485854.1	WIPI2-010	773	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496867.1	WIPI2-009	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488359.1	WIPI2-012	602	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480238.1	WIPI2-011	470	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475309.1	WIPI2-004	2558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471851.1	WIPI2-006	2523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466014.1	WIPI2-003	1700	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479690.1	WIPI2-013	824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465102.1	WIPI2-014	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,504 bps, Translation length: 384 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y4P8

CCDS

This transcript is a member of the Human CCDS set: CCDS47533

Version

ENST00000484262.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000323974 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000484262.1 WIPI2-005

Summary