Transcript: ENST00000345732.4 MS4A1-201

Description

membrane-spanning 4-domains, subfamily A, member 1 [Source:HGNC Symbol;Acc:7315]

Gene Synonyms

B1, Bp35, CD20, CVID5, LEU-16, MS4A2, S7

Location

Chromosome 11: 60,223,282-60,238,225 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 6809 variant alleles and maps to 659 oligo probes.

Gene

This transcript is a product of gene ENSG00000156738.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000534668.1	MS4A1-001	3475	297aa	ENSP00000433277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31570	P11836	NM_152866.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000389939.2	MS4A1-202	3372	297aa	ENSP00000374589.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31570	P11836	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000345732.4	MS4A1-201	3331	297aa	ENSP00000314620.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31570	P11836	NM_021950.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532073.1	MS4A1-002	2560	284aa	ENSP00000433519.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKH8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528313.1	MS4A1-003	928	130aa	ENSP00000432270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DT24	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533306.1	MS4A1-006	607	123aa	ENSP00000437002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PPL6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532491.1	MS4A1-008	558	6aa	ENSP00000432219.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524807.1	MS4A1-007	495	7aa	ENSP00000433179.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P11836	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000534503.1	MS4A1-004	933	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527101.1	MS4A1-005	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000532418.1	MS4A1-009	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000530482.1	MS4A1-010	484	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 3,331 bps, Translation length: 297 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11836

CCDS

This transcript is a member of the Human CCDS set: CCDS31570

Version

ENST00000345732.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000395402 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000345732.4 MS4A1-201

Summary