Transcript: ENST00000405941.3 TMEM18-003

Description

transmembrane protein 18 [Source:HGNC Symbol;Acc:25257]

Gene Synonyms

DKFZp434C1714

Location

Chromosome 2: 669,423-676,704 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 3644 variant alleles and maps to 248 oligo probes.

Gene

This transcript is a product of gene ENSG00000151353.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000281017.3	TMEM18-001	2762	140aa	ENSP00000281017.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33141	Q96B42	NM_152834.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355654.2	TMEM18-201	775	127aa	ENSP00000347874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96B42	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405941.3	TMEM18-003	654	143aa	ENSP00000384347.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MBX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432667.1	TMEM18-002	2572	66aa	ENSP00000390474.1	Nonsense mediated decay		F8WBA6	-	-
ENST00000418447.1	TMEM18-004	623	59aa	ENSP00000408658.1	Nonsense mediated decay		F8WEA7	-	-
ENST00000477202.1	TMEM18-005	1767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497508.1	TMEM18-007	1706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461640.1	TMEM18-006	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 654 bps, Translation length: 143 residues

Version

ENST00000405941.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000322429 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000405941.3 TMEM18-003

Summary