Transcript: ENST00000281017.3 TMEM18-001

Description

transmembrane protein 18 [Source:HGNC Symbol;Acc:25257]

Gene Synonyms

DKFZp434C1714

Location

Chromosome 2: 667,335-677,439 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 5089 variant alleles and maps to 429 oligo probes.

Gene

This transcript is a product of gene ENSG00000151353.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000281017.3	TMEM18-001	2762	140aa	ENSP00000281017.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33141	Q96B42	NM_152834.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355654.2	TMEM18-201	775	127aa	ENSP00000347874.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96B42	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000405941.3	TMEM18-003	654	143aa	ENSP00000384347.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MBX8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432667.1	TMEM18-002	2572	66aa	ENSP00000390474.1	Nonsense mediated decay		F8WBA6	-	-
ENST00000418447.1	TMEM18-004	623	59aa	ENSP00000408658.1	Nonsense mediated decay		F8WEA7	-	-
ENST00000477202.1	TMEM18-005	1767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497508.1	TMEM18-007	1706	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461640.1	TMEM18-006	844	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,762 bps, Translation length: 140 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96B42

CCDS

This transcript is a member of the Human CCDS set: CCDS33141

Version

ENST00000281017.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000322427 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000281017.3 TMEM18-001

Summary