Transcript: ENST00000540908.1 ZP1-002

Description

zona pellucida glycoprotein 1 (sperm receptor) [Source:HGNC Symbol;Acc:13187]

Gene Synonyms

HEL163

Location

About this transcript

This transcript has 3 exons, is annotated with 2 domains and features, is associated with 1072 variant alleles and maps to 97 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278853.5	ZP1-001	1954	638aa	ENSP00000278853.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31572	P60852	NM_207341.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540908.1	ZP1-002	418	40aa	ENSP00000441293.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000537203.1	ZP1-003	1573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543020.1	ZP1-005	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542971.1	ZP1-004	473	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 418 bps, Translation length: 40 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000540908.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000396330 (version 1)

Annotation Attributes

dotter confirmed [Definitions]