Transcript: ENST00000278853.5 ZP1-001

Description

zona pellucida glycoprotein 1 (sperm receptor) [Source:HGNC Symbol;Acc:13187]

Gene Synonyms

HEL163

Location

About this transcript

This transcript has 12 exons, is annotated with 22 domains and features, is associated with 4086 variant alleles and maps to 440 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278853.5	ZP1-001	1954	638aa	ENSP00000278853.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31572	P60852	NM_207341.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540908.1	ZP1-002	418	40aa	ENSP00000441293.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000537203.1	ZP1-003	1573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543020.1	ZP1-005	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542971.1	ZP1-004	473	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,954 bps, Translation length: 638 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P60852

CCDS

This transcript is a member of the Human CCDS set: CCDS31572

Version

ENST00000278853.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000396329 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.