Transcript: ENST00000528822.1 SLC5A12-006

Description

solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:HGNC Symbol;Acc:28750]

Gene Synonyms

MGC52019, SMCT2

Location

About this transcript

This transcript has 4 exons, is associated with 3503 variant alleles and maps to 102 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396005.3	SLC5A12-001	6250	618aa	ENSP00000379326.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7860	E9PLZ7 Q1EHB4	NM_178498.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000280467.6	SLC5A12-002	2269	396aa	ENSP00000280467.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLZ7 Q1EHB4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533617.1	SLC5A12-004	814	150aa	ENSP00000435053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527405.1	SLC5A12-005	1932	277aa	ENSP00000436011.1	Nonsense mediated decay		E9PLZ7 G3V1E3 Q8IUS7	-	-
ENST00000528822.1	SLC5A12-006	1095	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,095 bps,

Version

ENST00000528822.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388289 (version 1)