Transcript: ENST00000533617.1 SLC5A12-004

Description

solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12 [Source:HGNC Symbol;Acc:28750]

Gene Synonyms

MGC52019, SMCT2

Location

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 6930 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000396005.3	SLC5A12-001	6250	618aa	ENSP00000379326.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7860	E9PLZ7 Q1EHB4	NM_178498.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000280467.6	SLC5A12-002	2269	396aa	ENSP00000280467.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLZ7 Q1EHB4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000533617.1	SLC5A12-004	814	150aa	ENSP00000435053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PLZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527405.1	SLC5A12-005	1932	277aa	ENSP00000436011.1	Nonsense mediated decay		E9PLZ7 G3V1E3 Q8IUS7	-	-
ENST00000528822.1	SLC5A12-006	1095	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 814 bps, Translation length: 150 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000533617.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000388288 (version 2)