Transcript: ENST00000369797.3 PDCD11-001

Description

programmed cell death 11 [Source:HGNC Symbol;Acc:13408]

Gene Synonyms

ALG-4, ALG4, KIAA0185, NFBP, RRP5

Location

About this transcript

This transcript has 36 exons, is annotated with 74 domains and features, is associated with 22114 variant alleles and maps to 1134 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369797.3	PDCD11-001	6453	1871aa	ENSP00000358812.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31276	Q14690	NM_014976.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493610.2	PDCD11-002	732	38aa	ENSP00000474606.1	Nonsense mediated decay		S4R3Q4	-	-
ENST00000490787.1	PDCD11-006	101	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478543.1	PDCD11-004	717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466959.1	PDCD11-005	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471061.1	PDCD11-003	410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 36, Coding exons: 35, Transcript length: 6,453 bps, Translation length: 1,871 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14690

CCDS

This transcript is a member of the Human CCDS set: CCDS31276

Version

ENST00000369797.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000050151 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.