Transcript: ENST00000493610.2 PDCD11-002

Description

programmed cell death 11 [Source:HGNC Symbol;Acc:13408]

Gene Synonyms

ALG-4, ALG4, KIAA0185, NFBP, RRP5

Location

About this transcript

This transcript has 6 exons, is associated with 3847 variant alleles and maps to 140 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369797.3	PDCD11-001	6453	1871aa	ENSP00000358812.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31276	Q14690	NM_014976.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493610.2	PDCD11-002	732	38aa	ENSP00000474606.1	Nonsense mediated decay		S4R3Q4	-	-
ENST00000490787.1	PDCD11-006	101	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478543.1	PDCD11-004	717	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466959.1	PDCD11-005	500	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471061.1	PDCD11-003	410	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 732 bps, Translation length: 38 residues

Version

ENST00000493610.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000050152 (version 2)