Transcript: ENST00000414883.1 A1CF-003

Description

APOBEC1 complementation factor [Source:HGNC Symbol;Acc:24086]

Gene Synonyms

ACF, ACF64, ACF65, APOBEC1CF, ASP

Location

Chromosome 10: 52,595,834-52,645,435 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 19587 variant alleles and maps to 184 oligo probes.

Gene

This transcript is a product of gene ENSG00000148584.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374001.2	A1CF-001	9221	586aa	ENSP00000363113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7241	Q5T0W7 Q7Z2U9 Q9NQ94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395489.2	A1CF-202	2230	587aa	ENSP00000378868.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W9F8	NM_001198819.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373995.3	A1CF-006	2211	594aa	ENSP00000363107.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7243	Q9NQ94	NM_138933.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000282641.2	A1CF-201	2135	594aa	ENSP00000282641.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7242	Q5T0W7 Q7Z2U9 Q9NQ94	NM_138932.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373997.3	A1CF-004	2116	586aa	ENSP00000363109.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7241	Q5T0W7 Q7Z2U9 Q9NQ94	NM_014576.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373993.1	A1CF-002	1997	594aa	ENSP00000363105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7242	Q5T0W7 Q7Z2U9 Q9NQ94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395495.1	A1CF-203	1970	539aa	ENSP00000378873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T0W7 Q7Z2U9 Q9NQ94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414883.1	A1CF-003	885	201aa	ENSP00000397953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T0W7 Q7Z2U9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493415.1	A1CF-007	926	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473480.1	A1CF-005	813	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 4, Transcript length: 885 bps, Translation length: 201 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000414883.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048087 (version 4)

Favourite species

All species

Recent locations

Transcript: ENST00000414883.1 A1CF-003

Summary