Transcript: ENST00000373995.3 A1CF-006

Description

APOBEC1 complementation factor [Source:HGNC Symbol;Acc:24086]

Gene Synonyms

ACF, ACF64, ACF65, APOBEC1CF, ASP

Location

Chromosome 10: 52,566,322-52,645,435 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 23 domains and features, is associated with 31408 variant alleles and maps to 452 oligo probes.

Gene

This transcript is a product of gene ENSG00000148584.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374001.2	A1CF-001	9221	586aa	ENSP00000363113.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7241	Q5T0W7 Q7Z2U9 Q9NQ94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395489.2	A1CF-202	2230	587aa	ENSP00000378868.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W9F8	NM_001198819.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373995.3	A1CF-006	2211	594aa	ENSP00000363107.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7243	Q9NQ94	NM_138933.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000282641.2	A1CF-201	2135	594aa	ENSP00000282641.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7242	Q5T0W7 Q7Z2U9 Q9NQ94	NM_138932.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373997.3	A1CF-004	2116	586aa	ENSP00000363109.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7241	Q5T0W7 Q7Z2U9 Q9NQ94	NM_014576.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373993.1	A1CF-002	1997	594aa	ENSP00000363105.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7242	Q5T0W7 Q7Z2U9 Q9NQ94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395495.1	A1CF-203	1970	539aa	ENSP00000378873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T0W7 Q7Z2U9 Q9NQ94	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414883.1	A1CF-003	885	201aa	ENSP00000397953.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5T0W7 Q7Z2U9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000493415.1	A1CF-007	926	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473480.1	A1CF-005	813	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 2,211 bps, Translation length: 594 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQ94

CCDS

This transcript is a member of the Human CCDS set: CCDS7243

Version

ENST00000373995.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048090 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000373995.3 A1CF-006

Summary