Transcript: ENST00000461679.1 C9orf72-004

Description

chromosome 9 open reading frame 72 [Source:HGNC Symbol;Acc:28337]

Gene Synonyms

ALSFTD, FTDALS, MGC23980

Location

About this transcript

This transcript has 5 exons, is associated with 6231 variant alleles and maps to 216 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380003.3	C9orf72-001	3200	481aa	ENSP00000369339.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6522	Q96LT7 Q9NUW0	NM_018325.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379997.3	C9orf72-003	1873	222aa	ENSP00000369333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6523	Q96LT7	NM_145005.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379995.1	C9orf72-005	777	222aa	ENSP00000369331.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6523	Q96LT7	-	-
ENST00000488117.1	C9orf72-002	4808	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461679.1	C9orf72-004	862	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 862 bps,

Version

ENST00000461679.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000051972 (version 1)