Transcript: ENST00000519386.1 MRPS28-011

Description

mitochondrial ribosomal protein S28 [Source:HGNC Symbol;Acc:14513]

Gene Synonyms

HSPC007, MRP-S28, MRP-S35, MRPS35

Location

Chromosome 8: 80,831,090-80,942,074 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features, is associated with 46207 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSG00000147586.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276585.4	MRPS28-001	850	187aa	ENSP00000276585.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6226	E5RGC7 Q9Y2Q9	NM_014018.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518371.2	MRPS28-002	783	83aa	ENSP00000476135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521434.1	MRPS28-010	585	125aa	ENSP00000428880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFH3 E5RK86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519386.1	MRPS28-011	555	143aa	ENSP00000428050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGC7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518271.1	MRPS28-012	487	162aa	ENSP00000427846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521605.1	MRPS28-007	437	86aa	ENSP00000427965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520946.1	MRPS28-009	411	108aa	ENSP00000430401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK86	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519120.1	MRPS28-008	403	103aa	ENSP00000428744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522938.1	MRPS28-005	657	94aa	ENSP00000430858.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000522987.1	MRPS28-013	487	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 555 bps, Translation length: 143 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000519386.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000379530 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000519386.1 MRPS28-011

Summary