Transcript: ENST00000276585.4 MRPS28-001

Description

mitochondrial ribosomal protein S28 [Source:HGNC Symbol;Acc:14513]

Gene Synonyms

HSPC007, MRP-S28, MRP-S35, MRPS35

Location

Chromosome 8: 80,830,952-80,942,506 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 46699 variant alleles and maps to 274 oligo probes.

Gene

This transcript is a product of gene ENSG00000147586.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276585.4	MRPS28-001	850	187aa	ENSP00000276585.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6226	E5RGC7 Q9Y2Q9	NM_014018.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518371.2	MRPS28-002	783	83aa	ENSP00000476135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000521434.1	MRPS28-010	585	125aa	ENSP00000428880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFH3 E5RK86	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519386.1	MRPS28-011	555	143aa	ENSP00000428050.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGC7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518271.1	MRPS28-012	487	162aa	ENSP00000427846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521605.1	MRPS28-007	437	86aa	ENSP00000427965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFT8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520946.1	MRPS28-009	411	108aa	ENSP00000430401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RK86	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519120.1	MRPS28-008	403	103aa	ENSP00000428744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGC7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522938.1	MRPS28-005	657	94aa	ENSP00000430858.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000522987.1	MRPS28-013	487	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 850 bps, Translation length: 187 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2Q9

CCDS

This transcript is a member of the Human CCDS set: CCDS6226

Version

ENST00000276585.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000379526 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000276585.4 MRPS28-001

Summary