Description
chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:24290]
Gene Synonyms
CHGN, CSGalNAcT-1, ChGn, FLJ11264, GALNACT1, beta4GalNAcT
Location
Chromosome 8: 19,261,672-19,540,094 reverse strand.
About this transcript
This transcript has 10 exons, is annotated with 10 domains and features, is associated with 166953 variant alleles and maps to 574 oligo probes.
Gene
This transcript is a product of gene ENSG00000147408.10 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000454498.2 | CSGALNACT1-004 | 4232 | 532aa | ENSP00000411816.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | NM_001130518.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000332246.6 | CSGALNACT1-001 | 3872 | 532aa | ENSP00000330805.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | NM_018371.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000311540.4 | CSGALNACT1-201 | 3674 | 532aa | ENSP00000310891.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000544602.1 | CSGALNACT1-202 | 2012 | 532aa | ENSP00000442155.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000522854.1 | CSGALNACT1-005 | 1990 | 532aa | ENSP00000429809.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000523262.1 | CSGALNACT1-007 | 792 | 104aa | ENSP00000428089.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGB2 E5RJB6 E5RK93 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000517494.1 | CSGALNACT1-006 | 766 | 96aa | ENSP00000429130.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGB2 E5RJB6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000520003.1 | CSGALNACT1-012 | 646 | 53aa | ENSP00000428774.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGB2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000524213.1 | CSGALNACT1-009 | 554 | 14aa | ENSP00000427740.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000397998.3 | CSGALNACT1-002 | 3962 | 297aa | ENSP00000381084.3 | Nonsense mediated decay | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | - | |
| ENST00000519222.1 | CSGALNACT1-003 | 2352 | 297aa | ENSP00000428216.1 | Nonsense mediated decay | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | - | |
| ENST00000518542.1 | CSGALNACT1-016 | 895 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000523227.1 | CSGALNACT1-010 | 633 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000517651.1 | CSGALNACT1-011 | 582 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000523919.1 | CSGALNACT1-014 | 577 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000524112.1 | CSGALNACT1-013 | 478 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000522573.1 | CSGALNACT1-008 | 405 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000522732.1 | CSGALNACT1-015 | 296 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |