Description
chondroitin sulfate N-acetylgalactosaminyltransferase 1 [Source:HGNC Symbol;Acc:24290]
Gene Synonyms
CHGN, CSGalNAcT-1, ChGn, FLJ11264, GALNACT1, beta4GalNAcT
Location
Chromosome 8: 19,261,673-19,540,272 reverse strand.
About this transcript
This transcript has 9 exons, is annotated with 10 domains and features, is associated with 167084 variant alleles and maps to 505 oligo probes.
Gene
This transcript is a product of gene ENSG00000147408.10 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000454498.2 | CSGALNACT1-004 | 4232 | 532aa | ENSP00000411816.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | NM_001130518.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000332246.6 | CSGALNACT1-001 | 3872 | 532aa | ENSP00000330805.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | NM_018371.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000311540.4 | CSGALNACT1-201 | 3674 | 532aa | ENSP00000310891.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000544602.1 | CSGALNACT1-202 | 2012 | 532aa | ENSP00000442155.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000522854.1 | CSGALNACT1-005 | 1990 | 532aa | ENSP00000429809.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS6010 | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000523262.1 | CSGALNACT1-007 | 792 | 104aa | ENSP00000428089.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGB2 E5RJB6 E5RK93 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000517494.1 | CSGALNACT1-006 | 766 | 96aa | ENSP00000429130.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGB2 E5RJB6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000520003.1 | CSGALNACT1-012 | 646 | 53aa | ENSP00000428774.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E5RGB2 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000524213.1 | CSGALNACT1-009 | 554 | 14aa | ENSP00000427740.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000397998.3 | CSGALNACT1-002 | 3962 | 297aa | ENSP00000381084.3 | Nonsense mediated decay | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | - | |
| ENST00000519222.1 | CSGALNACT1-003 | 2352 | 297aa | ENSP00000428216.1 | Nonsense mediated decay | E5RGB2 E5RJB6 E5RK93 Q8TDX6 | - | - | |
| ENST00000518542.1 | CSGALNACT1-016 | 895 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000523227.1 | CSGALNACT1-010 | 633 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000517651.1 | CSGALNACT1-011 | 582 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000523919.1 | CSGALNACT1-014 | 577 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000524112.1 | CSGALNACT1-013 | 478 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000522573.1 | CSGALNACT1-008 | 405 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000522732.1 | CSGALNACT1-015 | 296 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |