Transcript: ENST00000274458.4 COMMD10-001

Description

COMM domain containing 10 [Source:HGNC Symbol;Acc:30201]

Gene Synonyms

PTD002

Location

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 117535 variant alleles and maps to 412 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274458.4	COMMD10-001	1469	202aa	ENSP00000274458.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34215	D6RJ90 Q9Y6G5	NM_016144.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000515539.1	COMMD10-002	869	188aa	ENSP00000427319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RJ90	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000506589.1	COMMD10-004	793	121aa	ENSP00000424611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y9N4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000507356.1	COMMD10-003	870	139aa	ENSP00000422448.1	Nonsense mediated decay		D6RC04	-	-
ENST00000503424.1	COMMD10-006	842	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508250.1	COMMD10-005	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,469 bps, Translation length: 202 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6G5

CCDS

This transcript is a member of the Human CCDS set: CCDS34215

Version

ENST00000274458.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000371033 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.