Transcript: ENST00000394877.3 TRMT10A-001

Description

tRNA methyltransferase 10 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:28403]

Gene Synonyms

HEL-S-88, MGC27034, RG9MTD2, TRM10

Location

Chromosome 4: 100,467,866-100,485,174 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 7445 variant alleles and maps to 503 oligo probes.

Gene

This transcript is a product of gene ENSG00000145331.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273962.3	TRMT10A-003	3694	339aa	ENSP00000273962.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	NM_152292.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394877.3	TRMT10A-001	3516	339aa	ENSP00000378343.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	NM_001134666.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394876.2	TRMT10A-002	1638	339aa	ENSP00000378342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455368.2	TRMT10A-005	802	205aa	ENSP00000397551.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R954	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514547.1	TRMT10A-004	788	199aa	ENSP00000423628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R954	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507394.1	TRMT10A-006	846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515831.1	TRMT10A-007	261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 3,516 bps, Translation length: 339 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TBZ6

CCDS

This transcript is a member of the Human CCDS set: CCDS3650

Version

ENST00000394877.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000253666 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000394877.3 TRMT10A-001

Summary