Transcript: ENST00000394876.2 TRMT10A-002

Description

tRNA methyltransferase 10 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:28403]

Gene Synonyms

HEL-S-88, MGC27034, RG9MTD2, TRM10

Location

Chromosome 4: 100,469,770-100,485,189 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 9 domains and features, is associated with 6758 variant alleles and maps to 302 oligo probes.

Gene

This transcript is a product of gene ENSG00000145331.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273962.3	TRMT10A-003	3694	339aa	ENSP00000273962.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	NM_152292.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394877.3	TRMT10A-001	3516	339aa	ENSP00000378343.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	NM_001134666.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394876.2	TRMT10A-002	1638	339aa	ENSP00000378342.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3650	D6R954 Q8TBZ6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000455368.2	TRMT10A-005	802	205aa	ENSP00000397551.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R954	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514547.1	TRMT10A-004	788	199aa	ENSP00000423628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R954	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507394.1	TRMT10A-006	846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000515831.1	TRMT10A-007	261	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,638 bps, Translation length: 339 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TBZ6

CCDS

This transcript is a member of the Human CCDS set: CCDS3650

Version

ENST00000394876.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253667 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000394876.2 TRMT10A-002

Summary