Transcript: ENST00000506245.1 GC-007

Description

group-specific component (vitamin D binding protein) [Source:HGNC Symbol;Acc:4187]

Gene Synonyms

DBP, DBP/GC, GRD3, VDBG, VDBP, hDBP

Location

Chromosome 4: 72,631,187-72,651,727 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 8746 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSG00000145321.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273951.8	GC-001	1972	474aa	ENSP00000273951.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3550	D6RF20 P02774	NM_001204306.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504199.1	GC-006	1777	493aa	ENSP00000421725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56332	D6RF20 P02774	NM_001204307.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513476.1	GC-004	1567	476aa	ENSP00000426683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF20 D6RF35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506245.1	GC-007	562	145aa	ENSP00000426718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF20	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509740.1	GC-003	1510	348aa	ENSP00000422664.1	Nonsense mediated decay		D6RBJ7 D6RF20	-	-
ENST00000503472.1	GC-005	1466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503364.1	GC-009	286	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505234.1	GC-008	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 562 bps, Translation length: 145 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000506245.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362267 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000506245.1 GC-007

Summary