Transcript: ENST00000509740.1 GC-003

Description

group-specific component (vitamin D binding protein) [Source:HGNC Symbol;Acc:4187]

Gene Synonyms

DBP, DBP/GC, GRD3, VDBG, VDBP, hDBP

Location

Chromosome 4: 72,607,445-72,649,782 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 27 domains and features, is associated with 18473 variant alleles and maps to 377 oligo probes.

Gene

This transcript is a product of gene ENSG00000145321.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273951.8	GC-001	1972	474aa	ENSP00000273951.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3550	D6RF20 P02774	NM_001204306.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504199.1	GC-006	1777	493aa	ENSP00000421725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56332	D6RF20 P02774	NM_001204307.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513476.1	GC-004	1567	476aa	ENSP00000426683.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF20 D6RF35	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506245.1	GC-007	562	145aa	ENSP00000426718.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RF20	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509740.1	GC-003	1510	348aa	ENSP00000422664.1	Nonsense mediated decay		D6RBJ7 D6RF20	-	-
ENST00000503472.1	GC-005	1466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503364.1	GC-009	286	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505234.1	GC-008	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 1,510 bps, Translation length: 348 residues

Version

ENST00000509740.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362263 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000509740.1 GC-003

Summary