Transcript: ENST00000462604.1 COL8A1-006

Description

collagen, type VIII, alpha 1 [Source:HGNC Symbol;Acc:2215]

Gene Synonyms

C3orf7, MGC9568

Location

About this transcript

This transcript has 2 exons, is associated with 17503 variant alleles and maps to 56 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261037.3	COL8A1-001	5705	744aa	ENSP00000261037.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2934	C9JTN9 P27658	NM_001850.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000273342.4	COL8A1-201	2596	744aa	ENSP00000273342.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2934	C9JTN9 P27658	NM_020351.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452013.1	COL8A1-003	659	113aa	ENSP00000387589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JTN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000463753.1	COL8A1-002	2964	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474648.1	COL8A1-005	841	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483969.1	COL8A1-004	832	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462604.1	COL8A1-006	190	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 190 bps,

Version

ENST00000462604.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000309006 (version 1)