Transcript: ENST00000564803.1 IRF8-006

Description

interferon regulatory factor 8 [Source:HGNC Symbol;Acc:5358]

Gene Synonyms

H-ICSBP, ICSBP, ICSBP1, IRF-8

Location

Chromosome 16: 85,936,444-85,952,406 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 15 domains and features, is associated with 8695 variant alleles and maps to 163 oligo probes.

Gene

This transcript is a product of gene ENSG00000140968.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000268638.5	IRF8-001	3030	426aa	ENSP00000268638.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10956	H3BPS5 H3BQH6 H3BQK3 H3BRT4 H3BT31 Q02556	NM_002163.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566369.1	IRF8-003	1582	152aa	ENSP00000455048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000563180.1	IRF8-002	1394	126aa	ENSP00000458047.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQK3 H3BVC2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000564803.1	IRF8-006	1038	328aa	ENSP00000456992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQH6 H3BQK3 H3BT31	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562492.1	IRF8-009	946	222aa	ENSP00000455452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BPS5 H3BRT4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569607.1	IRF8-010	880	220aa	ENSP00000456395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRT4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564617.1	IRF8-011	531	159aa	ENSP00000455784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQH6 H3BQK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000565552.1	IRF8-004	522	47aa	ENSP00000455816.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569145.1	IRF8-008	289	14aa	ENSP00000455760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000570088.1	IRF8-005	553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564056.1	IRF8-007	514	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,038 bps, Translation length: 328 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000564803.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430859 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000564803.1 IRF8-006

Summary